Class xlifepp::SVQBOrthoManager#
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template<class ScalarType, class MV, class OP>
class SVQBOrthoManager : public xlifepp::MatOrthoManager<ScalarType, MV, OP>#
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Inheritance diagram for xlifepp::SVQBOrthoManager:
Collaboration diagram for xlifepp::SVQBOrthoManager:
An implementation of the xlifepp::MatOrthoManager that performs orthogonalization using the SVQB iterative orthogonalization technique described by Stathapoulos and Wu.
This orthogonalization routine, while not returning the upper triangular factors of the popular Gram-Schmidt method, has a communication cost (measured in number of communication calls) that is independent of the number of columns in the basis.
Error methods
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virtual NumTraits<ScalarType>::RealScalar orthonormErrorMat(const MV &X, SmartPtr<const MV> MX = _smPtrNull) const#
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This method computes the error in orthonormality of a multivector, measured as the Frobenius norm of the difference
innerProd(X,Y) - I.The method has the option of exploiting a caller-provided
MX.
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virtual NumTraits<ScalarType>::RealScalar orthogErrorMat(const MV &X, const MV &Y, SmartPtr<const MV> MX = _smPtrNull, SmartPtr<const MV> MY = _smPtrNull) const#
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This method computes the error in orthogonality of two multivectors, measured as the Frobenius norm of
innerProd(X,Y).The method has the option of exploiting a caller-provided
MX.
Constructor/Destructor
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SVQBOrthoManager(SmartPtr<const OP> Op = _smPtrNull, bool debug = false)#
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Constructor specifying re-orthogonalization tolerance.
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inline ~SVQBOrthoManager()#
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Destructor.
Methods implementing xlifepp::MatOrthoManager
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virtual void projectMat(MV &X, std::vector<SmartPtr<const MV>> Q, std::vector<SmartPtr<MatrixEigenDense<ScalarType>>> C, SmartPtr<MV> MX, std::vector<SmartPtr<const MV>> MQ) const#
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Given a list of mutually orthogonal and internally orthonormal bases
Q, this method projects a multivectorXonto the space orthogonal to the individualQ[i], optionally returning the coefficients ofXfor the individualQ[i].All of this is done with respect to the inner product innerProd().
After calling this routine,
Xwill be orthogonal to each of theQ[i].- Parameters:
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X – [inout]
The multivector to be modified.
On output, the columns of
Xwill be orthogonal to eachQ[i], satisfying\[ X_{out} = X_{in} - \sum_i Q[i] \langle Q[i], X_{in} \rangle \] MX – [inout] The image of
Xunder the inner product operatorOp. If \( MX != 0\): On input, this is expected to be consistent withOp. X. On output, this is updated consistent with updates toX. If \( MX == 0\) or \( Op == 0\):MXis not referenced.-
C – [out] The coefficients of
Xin the basesQ[i]. IfC[i]is a non-null pointer andC[i]matches the dimensions ofXandQ[i], then the coefficients computed during the orthogonalization routine will be stored in the matrixC[i], similar to callingIfinnerProd(Q[i], X, C[i]);
C[i]points to a MatrixEigenDense with size inconsistent withXand[i], then a std::invalid_argument exception will be thrown. Otherwise, ifC.size() < iorC[i]is a null pointer, the caller will not have access to the computed coefficients. -
Q – [in] A list of multivector bases specifying the subspaces to be orthogonalized against, satisfying
\[ \langle Q[i], Q[j] \rangle = I \quad\textrm{if}\quad i=j \]and\[ \langle Q[i], Q[j] \rangle = 0 \quad\textrm{if}\quad i \neq j\ . \] MQ –
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virtual int normalizeMat(MV &X, SmartPtr<MatrixEigenDense<ScalarType>> B = _smPtrNull, SmartPtr<MV> MX = _smPtrNull) const#
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This method takes a multivector
Xand attempts to compute an orthonormal basis for \(colspan(X)\), with respect to innerProd().This method does not compute an upper triangular coefficient matrix
B.This routine returns an integer
rankstating the rank of the computed basis. IfXdoes not have full rank and the normalize() routine does not attempt to augment the subspace, thenrankmay be smaller than the number of columns inX. In this case, only the firstrankcolumns of outputXand firstrankrows ofBwill be valid.The method attempts to find a basis with dimension equal to the number of columns in
X. It does this by augmenting linearly dependent vectors inXwith random directions. A finite number of these attempts will be made; therefore, it is possible that the dimension of the computed basis is less than the number of vectors inX.- Parameters:
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X – [inout]
The multivector to be modified.
On output, the first
rankcolumns ofXsatisfy\[ \langle X[i], X[j] \rangle = \delta_{ij}\ . \]Also,\[ X_{in}(1:m,1:n) = X_{out}(1:m,1:rank) B(1:rank,1:n) \]wheremis the number of rows inXandnis the number of columns inX. MX – [inout] The image of
Xunder the inner product operatorOp. If \( MX != 0\): On input, this is expected to be consistent withOp. X. On output, this is updated consistent with updates toX. If \( MX == 0\) or \( Op == 0\):MXis not referenced.-
B – [out] The coefficients of the original
Xwith respect to the computed basis. IfBis a non-null pointer andBmatches the dimensions ofB, then the coefficients computed during the orthogonalization routine will be stored inB, similar to callingIfinnerProd(Xout, Xin, B);
Bpoints to a MatrixEigenDense with size inconsistent withX, then a std::invalid_argument exception will be thrown. Otherwise, ifBis null, the caller will not have access to the computed coefficients. This matrix is not necessarily triangular (as in a QR factorization); see the documentation of specific orthogonalization managers.
In general,
Bhas no non-zero structure.
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- Returns:
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Rank of the basis computed by this method, less than or equal to the number of columns in
X. This specifies how many columns in the returnedXand rows in the returnedBare valid.
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virtual int projectAndNormalizeMat(MV &X, std::vector<SmartPtr<const MV>> Q, std::vector<SmartPtr<MatrixEigenDense<ScalarType>>> C, SmartPtr<MatrixEigenDense<ScalarType>> B, SmartPtr<MV> MX = _smPtrNull, std::vector<SmartPtr<const MV>> MQ = std::vector<SmartPtr<const MV>>(1, _smPtrNull)) const#
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Given a set of bases
Q[i]and a multivectorX, this method computes an orthonormal basis for \(colspan(X) - \sum_i colspan(Q[i])\).This routine returns an integer
rankstating the rank of the computed basis. If the subspace \(colspan(X) - \sum_i colspan(Q[i])\) does not have dimension as large as the number of columns ofXand the orthogonalization manager doe not attempt to augment the subspace, thenrankmay be smaller than the number of columns ofX. In this case, only the firstrankcolumns of outputXand firstrankrows ofBwill be valid.The method attempts to find a basis with dimension the same as the number of columns in
X. It does this by augmenting linearly dependent vectors with random directions. A finite number of these attempts will be made; therefore, it is possible that the dimension of the computed basis is less than the number of vectors inX.- Parameters:
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X – [inout]
The multivector to be modified.
On output, the first
rankcolumns ofXsatisfy\[ \langle X[i], X[j] \rangle = \delta_{ij} \quad \textrm{and} \quad \langle X, Q[i] \rangle = 0\ . \]Also,\[ X_{in}(1:m,1:n) = X_{out}(1:m,1:rank) B(1:rank,1:n) + \sum_i Q[i] C[i] \]wheremis the number of rows inXandnis the number of columns inX. MX – [inout] The image of
Xunder the inner product operatorOp. If \( MX != 0\): On input, this is expected to be consistent withOp. X. On output, this is updated consistent with updates toX. If \( MX == 0\) or \( Op == 0\):MXis not referenced.-
C – [out] The coefficients of
Xin theQ[i]. IfC[i]is a non-null pointer andC[i]matches the dimensions ofXandQ[i], then the coefficients computed during the orthogonalization routine will be stored in the matrixC[i], similar to callingIfinnerProd(Q[i], X, C[i]);
C[i]points to a MatrixEigenDense with size inconsistent withXand[i], then a std::invalid_argument exception will be thrown. Otherwise, ifC.size() < iorC[i]is a null pointer, the caller will not have access to the computed coefficients. -
B – [out] The coefficients of the original
Xwith respect to the computed basis. IfBis a non-null pointer andBmatches the dimensions ofB, then the coefficients computed during the orthogonalization routine will be stored inB, similar to callingIfinnerProd(Xout, Xin, B);
Bpoints to a MatrixEigenDense with size inconsistent withX, then a std::invalid_argument exception will be thrown. Otherwise, ifBis null, the caller will not have access to the computed coefficients. This matrix is not necessarily triangular (as in a QR factorization); see the documentation of specific orthogonalization managers.
In general,
Bhas no non-zero structure. -
Q – [in] A list of multivector bases specifying the subspaces to be orthogonalized against, satisfying
\[ \langle Q[i], Q[j] \rangle = I \quad\textrm{if}\quad i=j \]and\[ \langle Q[i], Q[j] \rangle = 0 \quad\textrm{if}\quad i \neq j\ . \] MQ –
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- Returns:
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Rank of the basis computed by this method, less than or equal to the number of columns in
X. This specifies how many columns in the returnedXand rows in the returnedBare valid.
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virtual NumTraits<ScalarType>::RealScalar orthonormErrorMat(const MV &X, SmartPtr<const MV> MX = _smPtrNull) const#